论文标题

EBHI-SEG:一种新型的肠镜活检组织病理学血肿和曙红图像数据集,用于图像分割任务

EBHI-Seg: A Novel Enteroscope Biopsy Histopathological Haematoxylin and Eosin Image Dataset for Image Segmentation Tasks

论文作者

Shi, Liyu, Li, Xiaoyan, Hu, Weiming, Chen, Haoyuan, Chen, Jing, Fan, Zizhen, Gao, Minghe, Jing, Yujie, Lu, Guotao, Ma, Deguo, Ma, Zhiyu, Meng, Qingtao, Tang, Dechao, Sun, Hongzan, Grzegorzek, Marcin, Qi, Shouliang, Teng, Yueyang, Li, Chen

论文摘要

背景和目的:大肠癌是一种常见的致命恶性肿瘤,是男性的第四个常见癌症,也是全球女性第三大常见的癌症。及时检测癌症的早期阶段对于治疗该疾病至关重要。目前,缺乏用于直肠癌组织病理学图像分割的数据集,当使用计算机技术帮助诊断时,这通常会阻碍评估的准确性。方法:本研究为图像分割任务(EBHI-SEG)提供了一种新的公开可用的肠镜检查组织病理苏木精和曙红图像数据集。为了证明EBHI-SEG的有效性和扩展性,使用经典的机器学习方法和深度学习方法评估了EBHI-SEG的实验结果。结果:实验结果表明,使用EBHI-SEG时,深度学习方法具有更好的图像分割性能。经典机器学习方法的骰子评估度量指标的最大准确性为0.948,而深度学习方法的骰子评估指标为0.965。结论:该公开可用的数据集包含5,170张六种类型的肿瘤分化阶段和相应地面真相图像的图像。该数据集可以为研究人员提供新的分割算法,以诊断结直肠癌的医学诊断,可用于临床环境中,以帮助医生和患者。

Background and Purpose: Colorectal cancer is a common fatal malignancy, the fourth most common cancer in men, and the third most common cancer in women worldwide. Timely detection of cancer in its early stages is essential for treating the disease. Currently, there is a lack of datasets for histopathological image segmentation of rectal cancer, which often hampers the assessment accuracy when computer technology is used to aid in diagnosis. Methods: This present study provided a new publicly available Enteroscope Biopsy Histopathological Hematoxylin and Eosin Image Dataset for Image Segmentation Tasks (EBHI-Seg). To demonstrate the validity and extensiveness of EBHI-Seg, the experimental results for EBHI-Seg are evaluated using classical machine learning methods and deep learning methods. Results: The experimental results showed that deep learning methods had a better image segmentation performance when utilizing EBHI-Seg. The maximum accuracy of the Dice evaluation metric for the classical machine learning method is 0.948, while the Dice evaluation metric for the deep learning method is 0.965. Conclusion: This publicly available dataset contained 5,170 images of six types of tumor differentiation stages and the corresponding ground truth images. The dataset can provide researchers with new segmentation algorithms for medical diagnosis of colorectal cancer, which can be used in the clinical setting to help doctors and patients.

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