论文标题

多阶段分层捕获重新捕获模型

Multistage Hierarchical Capture-Recapture Models

论文作者

Hooten, Mevin B, Schwob, Michael R, Johnson, Devin S, Ivan, Jacob S.

论文摘要

生态学家越来越依赖贝叶斯方法来拟合捕获征用模型。捕获重新接收模型用于估计丰度,同时考虑到单个级别数据中不完美的可检测性。对于此类模型,存在各种实现,包括集成的可能性,参数扩展的数据增强和这些组合。具有潜在随机效果的捕获征收模型可以在计算上使用常规的贝叶斯算法进行计算密集型。我们通过考虑模型结构的条件表示来确定捕获重新接收模型的替代规格。可以通过导致更稳定的计算的方式指定所得的替代模型,并使我们能够在阶段拟合所需的模型,同时利用并行计算资源。我们的模型规范包括一个用于检测到的个体的捕获历史记录的组件和样本量的另一个成分,该组件是随机观察到的。我们使用三个示例,包括模拟和两个数据集,这些数据集由不同物种的捕获回顾研究产生。

Ecologists increasingly rely on Bayesian methods to fit capture-recapture models. Capture-recapture models are used to estimate abundance while accounting for imperfect detectability in individual-level data. A variety of implementations exist for such models, including integrated likelihood, parameter-expanded data augmentation, and combinations of those. Capture-recapture models with latent random effects can be computationally intensive to fit using conventional Bayesian algorithms. We identify alternative specifications of capture-recapture models by considering a conditional representation of the model structure. The resulting alternative model can be specified in a way that leads to more stable computation and allows us to fit the desired model in stages while leveraging parallel computing resources. Our model specification includes a component for the capture history of detected individuals and another component for the sample size which is random before observed. We demonstrate this approach using three examples including simulation and two data sets resulting from capture-recapture studies of different species.

扫码加入交流群

加入微信交流群

微信交流群二维码

扫码加入学术交流群,获取更多资源