论文标题

一个基于深度学习的综合框架,用于质量意识不足的电影心脏MRI重建和分析

A Deep Learning-based Integrated Framework for Quality-aware Undersampled Cine Cardiac MRI Reconstruction and Analysis

论文作者

Machado, Inês P., Puyol-Antón, Esther, Hammernik, Kerstin, Cruz, Gastão, Ugurlu, Devran, Olakorede, Ihsane, Oksuz, Ilkay, Ruijsink, Bram, Castelo-Branco, Miguel, Young, Alistair A., Prieto, Claudia, Schnabel, Julia A., King, Andrew P.

论文摘要

电影心脏磁共振(CMR)成像被认为是心脏功能评估的金标准。但是,Cine CMR的采集本质上是缓慢的,并且在近几十年中,已经为加速扫描时间而付出了巨大的努力,而不会损害图像质量或派生结果的准确性。在本文中,我们提出了一个完全自动化的,质量控制的集成框架,用于重建,分割和下游分析,分析不足的Cine CMR数据。该框架可以积极地获取径向K-Space数据,其中一旦获得数据就足以产生高质量的重建和分割,可以立即停止采集。这导致扫描时间减少和自动分析,从而实现了功能性生物标志物的稳健和准确估计。为了证明所提出的方法的可行性,我们对来自英国生物库的受试者的数据集进行了径向k空间获取的现实模拟,并对从健康受试者收集的Vivo Cine Cine CINE CMR K-Space数据进行了最新结果。结果表明,我们的方法可以在平均扫描时间中产生质量控制的图像,从而从每切12秒减少到4秒,并且该图像质量足以使临床上相关的参数自动估计为5%以内的平均绝对差。

Cine cardiac magnetic resonance (CMR) imaging is considered the gold standard for cardiac function evaluation. However, cine CMR acquisition is inherently slow and in recent decades considerable effort has been put into accelerating scan times without compromising image quality or the accuracy of derived results. In this paper, we present a fully-automated, quality-controlled integrated framework for reconstruction, segmentation and downstream analysis of undersampled cine CMR data. The framework enables active acquisition of radial k-space data, in which acquisition can be stopped as soon as acquired data are sufficient to produce high quality reconstructions and segmentations. This results in reduced scan times and automated analysis, enabling robust and accurate estimation of functional biomarkers. To demonstrate the feasibility of the proposed approach, we perform realistic simulations of radial k-space acquisitions on a dataset of subjects from the UK Biobank and present results on in-vivo cine CMR k-space data collected from healthy subjects. The results demonstrate that our method can produce quality-controlled images in a mean scan time reduced from 12 to 4 seconds per slice, and that image quality is sufficient to allow clinically relevant parameters to be automatically estimated to within 5% mean absolute difference.

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