论文标题

基于深度学习的自动检测折染色体

Deep Learning based Automatic Detection of Dicentric Chromosome

论文作者

Wadhwa, Angad Singh, Tyagi, Nikhil, Chowdhury, Pinaki Roy

论文摘要

自动检测二齿染色体是估计辐射暴露和端到端紧急生物剂量测定系统的发展的重要步骤。在事故期间,需要对大量数据进行大量数据进行大量测试,以制定群众的医疗计划,这需要自动化此过程。当前的方法需要根据数据进行调整,因此需要人类专家来校准系统。本文提出了一个完全数据驱动的框架,该框架需要对现场专家的最低干预,并且可以相对轻松地在紧急情况下部署。我们的方法涉及Yolov4检测染色体并去除每个图像中的碎屑,然后进行分类器,该分类器区分可分析染色体和不可分析的染色体。图像是根据WHO-Biodosnet描述的协议从Yolov4提取的。可分析的染色体被归类为单中心或二十分位,并且接受图像以根据可分析的染色体计数来考虑剂量估计。我们报告说,在1:1的二齿和单中心染色体上,二次鉴定的准确性为94.33%。

Automatic detection of dicentric chromosomes is an essential step to estimate radiation exposure and development of end to end emergency bio dosimetry systems. During accidents, a large amount of data is required to be processed for extensive testing to formulate a medical treatment plan for the masses, which requires this process to be automated. Current approaches require human adjustments according to the data and therefore need a human expert to calibrate the system. This paper proposes a completely data driven framework which requires minimum intervention of field experts and can be deployed in emergency cases with relative ease. Our approach involves YOLOv4 to detect the chromosomes and remove the debris in each image, followed by a classifier that differentiates between an analysable chromosome and a non-analysable one. Images are extracted from YOLOv4 based on the protocols described by WHO-BIODOSNET. The analysable chromosome is classified as Monocentric or Dicentric and an image is accepted for consideration of dose estimation based on the analysable chromosome count. We report an accuracy in dicentric identification of 94.33% on a 1:1 split of Dicentric and Monocentric Chromosomes.

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