论文标题

NMR通过线性编程分配

NMR Assignment through Linear Programming

论文作者

Bravo-Ferreira, Jose F. S., Cowburn, David, Khoo, Yuehaw, Singer, Amit

论文摘要

核磁共振(NMR)光谱是用于蛋白质结构测定的第二种最常用的技术(仅次于X射线晶体学)。该技术中的计算挑战涉及解决一个离散优化问题,该问题将共振频率分配给蛋白质中的每个原子。本文介绍了Lian(NMR的线性编程分配),这是该问题的新型线性编程公式,从而产生了最先进的方法,从而导致模拟和实验性数据集。

Nuclear Magnetic Resonance (NMR) Spectroscopy is the second most used technique (after X-ray crystallography) for structural determination of proteins. A computational challenge in this technique involves solving a discrete optimization problem that assigns the resonance frequency to each atom in the protein. This paper introduces LIAN (LInear programming Assignment for NMR), a novel linear programming formulation of the problem which yields state-of-the-art results in simulated and experimental datasets.

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