论文标题

静态和时间网络中的图案发现算法:调查

Motif Discovery Algorithms in Static and Temporal Networks: A Survey

论文作者

Jazayeri, Ali, Yang, Christopher C.

论文摘要

图案是复杂系统的基本组成部分。代表复杂系统的网络的拓扑结构以及这些网络中基序的频率和分布相互交织。作为频繁的子图挖掘的核心,与图形和子图同构问题相关的复杂性对基序发现算法的性能有直接影响。为了应对这些复杂性,研究人员采用了不同的策略来产生和枚举以及频率计算。在过去的几年中,人们对时间网络的分析和采矿越来越感兴趣。与它们的静态对应物相比,这些网络以插入,删除或替换边缘或顶点或其属性的形式随时间变化。在本文中,我们提供了针对静态和时间网络的文献中提出的图案发现算法的调查,并根据其采用的候选生成和频率计算的策略来审查相应的算法。当我们目睹社交媒体平台,生物信息学应用程序以及通信和运输网络以及分布式计算和大数据技术的进步中,我们还对拟议解决CPU结合的算法进行了调查,并在开采静态和临时网络中解决了I/O的问题。

Motifs are the fundamental components of complex systems. The topological structure of networks representing complex systems and the frequency and distribution of motifs in these networks are intertwined. The complexities associated with graph and subgraph isomorphism problems, as the core of frequent subgraph mining, have direct impacts on the performance of motif discovery algorithms. To cope with these complexities, researchers have adopted different strategies for candidate generation and enumeration, and frequency computation. In the past few years, there has been an increasing interest in the analysis and mining of temporal networks. These networks, in contrast to their static counterparts, change over time in the form of insertion, deletion, or substitution of edges or vertices or their attributes. In this paper, we provide a survey of motif discovery algorithms proposed in the literature for mining static and temporal networks and review the corresponding algorithms based on their adopted strategies for candidate generation and frequency computation. As we witness the generation of a large amount of network data in social media platforms, bioinformatics applications, and communication and transportation networks and the advance in distributed computing and big data technology, we also conduct a survey on the algorithms proposed to resolve the CPU-bound and I/O bound problems in mining static and temporal networks.

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