论文标题
Sage:用于使用有限数据集分析胶质母细胞瘤的顺序属性生成器
SAGE: Sequential Attribute Generator for Analyzing Glioblastomas using Limited Dataset
论文作者
论文摘要
尽管深度学习方法在许多成像任务中都表现出了出色的性能,但大多数这些方法都取决于大量数据的可用性。但是,医疗图像数据稀缺和分散。生成对抗网络(GAN)最近通过生成更多数据来处理此类数据集非常有效。但是,如果数据集很小,则甘斯无法正确学习数据分布,从而导致较少或低质量的结果。这样有限的数据集是,同时增益为19和20染色体(19/20 Co-Gain),这是一个在胶质母细胞瘤(GBM)中具有正预后价值的突变。在本文中,我们检测到成像生物标志物的突变,以简化广泛和侵入性的预后管道。由于该突变相对较少,即小数据集,因此我们提出了一个新颖的生成框架 - 顺序属性发生器(SAGE),该框架生成详细的肿瘤成像特征,同时从有限的数据集中学习。实验表明,与标准的深卷积GAN(DC-GAN)和WASSERSTEIN GAN相比,SAGE不仅会产生高质量的肿瘤,并具有梯度惩罚(WGAN-GP),还可以准确捕获成像生物标志物。
While deep learning approaches have shown remarkable performance in many imaging tasks, most of these methods rely on availability of large quantities of data. Medical image data, however, is scarce and fragmented. Generative Adversarial Networks (GANs) have recently been very effective in handling such datasets by generating more data. If the datasets are very small, however, GANs cannot learn the data distribution properly, resulting in less diverse or low-quality results. One such limited dataset is that for the concurrent gain of 19 and 20 chromosomes (19/20 co-gain), a mutation with positive prognostic value in Glioblastomas (GBM). In this paper, we detect imaging biomarkers for the mutation to streamline the extensive and invasive prognosis pipeline. Since this mutation is relatively rare, i.e. small dataset, we propose a novel generative framework - the Sequential Attribute GEnerator (SAGE), that generates detailed tumor imaging features while learning from a limited dataset. Experiments show that not only does SAGE generate high quality tumors when compared to standard Deep Convolutional GAN (DC-GAN) and Wasserstein GAN with Gradient Penalty (WGAN-GP), it also captures the imaging biomarkers accurately.